| graph: Edge | The network graph object model |
| as.data.frame.vertexedge | VertexEdge: |
| graph | create a new graph object with the given network edge data and the node properties |
| V | get graph vertex collection |
| E | get graph edge collection. |
| xref | get node reference id list |
| subgraphFromPoint | extract sub-network from a given network via a specific network node as centroid. |
| metadata | create meta data for network tabular model. |
| tabular_graph | |
| gephi_gml | |
| save.network | save the network graph |
| read.network | load network graph object from a given file location |
| empty.network | Create a new network graph or clear the given network graph |
| trim.edges | removes duplicated edges in the network |
| connected_graph | removes all of the isolated nodes. |
| node.names | set node data names |
| degree | Calculate node degree in given graph |
| compute.network | compute network properties' data |
| eval | evaluate node/edge property values |
| delete | |
| add.nodes | a nodes by given label list. |
| add.node | |
| mass | set or get mass value of the nodes in the given graph |
| attrs | Set node attribute data |
| add.edge | add edge link into the given network graph |
| weight | set edge weight and get edge weights |
| pushEdges | Add edges by a given node label tuple list |
| getElementByID | get node elements by given id |
| group | Make node groups by given type name |
| class | get/set node class type |
| vertex | get all nodes in the given graph model |
| edges | get all edges in the given graph model |
| has.edge | |
| attributes | get or set element attribute values |
| selects | Node select by group or other condition |
| decompose | Decompose a graph into components, Creates a separate graph for each component of a graph. |
| extract.sub_graph | extract sub graph component by a specific given node group tag data. |
| components | get subnetwork components directly by test node disconnections |
| louvain_cluster | |
| MST | Find MST via Kruskal algorithm |